WEBVTT 1 00:00:00.920 --> 00:00:04.810 Welcome to the Integrated Chemical Environment, also known as ICE. 2 00:00:04.840 --> 00:00:07.060 In this video, we will provide a brief 3 00:00:07.090 --> 00:00:09.860 introduction to the ICE Curve Surfer tool. 4 00:00:09.890 --> 00:00:15.104 Other videos explain in detail how to set up a query using the ICE 5 00:00:15.304 --> 00:00:18.580 Curve Surfer tool, and how to view and save query results. 6 00:00:18.600 --> 00:00:20.860 The ICE Curve Surfer tool allows you to 7 00:00:20.890 --> 00:00:23.714 view and interact with concentration-response curves 8 00:00:23.914 --> 00:00:25.420 from the in vitro high-throughput 9 00:00:25.450 --> 00:00:30.220 screening data in ICE that has been curated by NICEATM. 10 00:00:30.240 --> 00:00:35.500 This tool allows users to input one or more chemicals or assays to view a set 11 00:00:35.530 --> 00:00:39.500 of concentration-response curves that can be sorted and filtered. 12 00:00:39.530 --> 00:00:41.860 Both graphics and data can be exported 13 00:00:41.890 --> 00:00:47.620 to save or to build additional queries in ICE or other resources. 14 00:00:47.650 --> 00:00:50.900 Each graph viewed in the Curve Surfer query results 15 00:00:50.930 --> 00:00:55.820 landing page is a single chemical-assay concentration-response curve. 16 00:00:55.850 --> 00:01:00.940 Each graph is accompanied by information that can help contextualize the curve: 17 00:01:00.970 --> 00:01:04.260 the AC50 informs on the chemical's potency 18 00:01:04.290 --> 00:01:09.460 in the assay, while the top of curve informs on the chemical's efficacy. 19 00:01:09.490 --> 00:01:11.380 Mechanistic target annotations 20 00:01:11.410 --> 00:01:16.290 for the assay are also provided to facilitate interpretation. 21 00:01:16.320 --> 00:01:21.340 Several options are provided to organize Curve Surfer query results. 22 00:01:21.370 --> 00:01:26.140 Large queries may span multiple pages and can be sorted and filtered. 23 00:01:26.170 --> 00:01:28.660 You can also overlay several concentration 24 00:01:28.690 --> 00:01:33.140 curves of interest to view them all on one plot. 25 00:01:33.170 --> 00:01:35.210 Located throughout the tool are green 26 00:01:35.240 --> 00:01:39.540 information buttons to help you better understand key features and results. 27 00:01:39.570 --> 00:01:43.700 When you hover over a button, brief explanatory text will appear. 28 00:01:43.730 --> 00:01:47.290 When you click a button, more details will appear in a text box 29 00:01:47.320 --> 00:01:52.290 that can be relocated on the screen for a clearer field of vision. 30 00:01:52.320 --> 00:01:56.460 If you encounter a problem using a tool, click the "Report an Issue" button 31 00:01:56.490 --> 00:01:59.680 on the left side of the display to generate an email to ICE Support. 32 00:02:02.680 --> 00:02:07.020 Thank you for watching our introduction video for the Curve Surfer tool in ICE. 33 00:02:07.050 --> 00:02:11.160 For more detailed information on the tool, go to "Help" and select "User Guides."